BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022G01SP1|AL427941
(388 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig171 197 2e-50
>3x_Contig171
Length = 902
Score = 197 bits (96), Expect = 2e-50
Identities = 105/114 (92%)
Strand = Plus / Plus
Query: 170 cttatatttkatkaataaacatttcgagattaaatacctttgataaaataacaattattc 229
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 cttatattttattaataaacatttcgagattaaatacctttgataaaataacaattattc 71
Query: 230 cccaaataatatttatvgctgtaccattctttattatttkrtkarakrataata 283
|||||||||||||||| |||||||||||||||||||||| | | | ||||||
Sbjct: 72 cccaaataatatttatagctgtaccattctttattattttattaaataataata 125
Score = 172 bits (84), Expect = 4e-43
Identities = 89/92 (96%)
Strand = Plus / Plus
Query: 297 gggctatactaacatatatktcgtggaaaaccagctatttgcgaaccagatttgtctttc 356
||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 139 gggctatactaacatatatttcgtggtaaaccagctatttgcgaaccagatttgtctttc 198
Query: 357 accgcttaacacaactcatcagatgakattgc 388
|||||||||||||||||||||||||| |||||
Sbjct: 199 accgcttaacacaactcatcagatgatattgc 230
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.42 0.717 1.34
Gapped
Lambda K H
1.42 0.717 1.34
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2197
Number of Sequences: 1807
Number of extensions: 2197
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 1
length of query: 388
length of database: 10,358,551
effective HSP length: 15
effective length of query: 373
effective length of database: 10,331,446
effective search space: 3853629358
effective search space used: 3853629358
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.7 bits)
S1: 11 (23.0 bits)
S2: 48 (98.8 bits)